PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_1AL_3B659AABA.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 482aa    MW: 53620.4 Da    PI: 6.7516
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_1AL_3B659AABA.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.11.4e-11172200533
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                            k err+++NReAAr+sR+RKka++++Le+
  Traes_1AL_3B659AABA.1 172 KTERRLAQNREAARKSRLRKKAYVQQLET 200
                            88*************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-5168234IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.933170214IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-7170211No hitNo description
PfamPF001706.6E-9172200IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.44E-7172207No hitNo description
PROSITE patternPS000360175190IPR004827Basic-leucine zipper domain
PfamPF141447.9E-27253327IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 482 aa     Download sequence    Send to blast
MPKAWILREL QPAAAAYFGE LEEALIHGTC AAGIDPVMIE SDAHTKSAAV TAAAGYLAAR  60
PPTLEIFPSW PMSHLQQPYS GNSQSVGSTD SSSAQNTMSQ AELVSPVSMR TDSGQQQQNQ  120
QEALMVTIDD YNYSQGLGAA PATAPSFQQH AGAQDKRKHG STRKDGKLVD PKTERRLAQN  180
REAARKSRLR KKAYVQQLET GRIRLQQIEQ EIQRGRSQGL LTGGCSAPGE MSSAAVMFDM  240
EYARWLDEDN KYMAEIQGAL QAQVLDANLG TIVEDCMRHH DELFHLRAVL ARSDVFHLMT  300
GMWATQSERC FLWMAGFRPS EILKMLIPQL DPSTKQQLLG MCNLQQSSEQ AEEALEQGLK  360
QLHQSLADAV GAGPLNDGAD VANYTGLMAL ALDRLNNLES FYRQADNLRQ QTLHHMRRIL  420
TTRQTARCFV SLGEYHRRLR ALSSIWASRP RENFMMPENV SSTATEFQSV HQQPQQNQFS  480
GL
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3701950.0AK370195.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2106J11.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010231321.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X7
SwissprotQ415581e-109HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLW4ZND50.0W4ZND5_WHEAT; Uncharacterized protein
STRINGMLOC_79223.30.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38093166
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-114bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]